Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC144831.1-201ENST00000573312 2656 ntBASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 AL020989.1-201ENST00000422979 469 ntBASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 RPS2P1-201ENST00000434010 821 ntBASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 PRYP5-201ENST00000451909 266 ntBASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 AC139887.3-201ENST00000568585 713 ntBASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 SIGLEC16-201ENST00000599858 1437 ntBASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 IL9RP2-201ENST00000423948 1312 ntBASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 SPDYE21P-201ENST00000413323 827 ntBASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 ACTG1P4-201ENST00000425123 1122 ntBASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 BX005266.1-201ENST00000473402 457 ntBASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 AC025062.2-201ENST00000605477 670 ntBASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB40AQ8WXH6 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms