Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 LYPLA2P1-203ENST00000447689 696 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 PGAM1P12-201ENST00000505622 748 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AP001350.2-201ENST00000625104 1094 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 OR2A1-AS1-203ENST00000468575 568 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC083801.1-201ENST00000491689 358 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 RN7SL67P-201ENST00000492147 296 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 FAM86FP-201ENST00000338711 969 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 RN7SL494P-201ENST00000461517 304 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 NDUFS6P1-201ENST00000485187 316 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 OR3A1-202ENST00000615105 966 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC126763.1-201ENST00000552015 2118 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 AC026803.1-201ENST00000569130 274 ntBASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE2Q8WXH0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 AC002511.3-201ENST00000638098 420 ntBASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 HNRNPA1P41-201ENST00000397777 928 ntBASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNE2Q8WXH0 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms