Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 KRT126P-201ENST00000549467 1181 ntBASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 AC006557.2-201ENST00000592985 1240 ntBASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 AC107918.4-202ENST00000641623 219 ntBASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 AL671710.1-201ENST00000610245 2349 ntBASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 FAAHP1-202ENST00000446499 1238 ntBASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 FAM197Y8-203ENST00000450145 560 ntBASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TP73-AS1-207ENST00000624167 988 ntBASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RTN4IP1Q8WWV3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms