Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 GPAA1P2-202ENST00000606848 1787 ntBASIC16.38■□□□□ 0.21
HMGB4Q8WW32 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AL512384.1-201ENST00000406683 331 ntBASIC16.38■□□□□ 0.21
HMGB4Q8WW32 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AC132938.2-201ENST00000579188 680 ntBASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AL591163.1-201ENST00000641757 987 ntBASIC16.38■□□□□ 0.21
HMGB4Q8WW32 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 KRT8P12-202ENST00000472924 1397 ntBASIC16.38■□□□□ 0.21
HMGB4Q8WW32 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGB4Q8WW32 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 AC114501.2-201ENST00000439631 535 ntBASIC16.37■□□□□ 0.21
HMGB4Q8WW32 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 AC011495.1-201ENST00000498085 584 ntBASIC16.37■□□□□ 0.21
HMGB4Q8WW32 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.37■□□□□ 0.21
HMGB4Q8WW32 AL031731.1-201ENST00000642131 2094 ntBASIC16.37■□□□□ 0.21
HMGB4Q8WW32 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGB4Q8WW32 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.36■□□□□ 0.21
HMGB4Q8WW32 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 TPRX2P-201ENST00000535362 881 ntBASIC16.36■□□□□ 0.21
HMGB4Q8WW32 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 AL109936.8-201ENST00000641772 604 ntBASIC16.36■□□□□ 0.21
HMGB4Q8WW32 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGB4Q8WW32 SLC7A15P-201ENST00000424028 1363 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms