Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 AL109936.8-201ENST00000641772 604 ntBASIC20.02■□□□□ 0.8
RTL9Q8NET4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL9Q8NET4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL9Q8NET4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL9Q8NET4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL9Q8NET4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL9Q8NET4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL9Q8NET4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 SPDYE19P-201ENST00000338590 713 ntBASIC20.01■□□□□ 0.79
RTL9Q8NET4 AC079776.1-201ENST00000401540 1152 ntBASIC20.01■□□□□ 0.79
RTL9Q8NET4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 INE1-201ENST00000456273 945 ntBASIC20.01■□□□□ 0.79
RTL9Q8NET4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 GIMAP3P-201ENST00000495150 836 ntBASIC20.01■□□□□ 0.79
RTL9Q8NET4 AC055876.2-201ENST00000531834 546 ntBASIC20.01■□□□□ 0.79
RTL9Q8NET4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 AC074044.1-201ENST00000609673 707 ntBASIC20.01■□□□□ 0.79
RTL9Q8NET4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RTL9Q8NET4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL9Q8NET4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RTL9Q8NET4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
RTL9Q8NET4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20■□□□□ 0.79
RTL9Q8NET4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTL9Q8NET4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTL9Q8NET4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20■□□□□ 0.79
RTL9Q8NET4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RTL9Q8NET4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20■□□□□ 0.79
RTL9Q8NET4 GPR53P-205ENST00000457298 1084 ntBASIC20■□□□□ 0.79
RTL9Q8NET4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20■□□□□ 0.79
RTL9Q8NET4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20■□□□□ 0.79
RTL9Q8NET4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTL9Q8NET4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RTL9Q8NET4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20■□□□□ 0.79
RTL9Q8NET4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20■□□□□ 0.79
RTL9Q8NET4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20■□□□□ 0.79
RTL9Q8NET4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
RTL9Q8NET4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20■□□□□ 0.79
RTL9Q8NET4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RTL9Q8NET4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTL9Q8NET4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL9Q8NET4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 AC087499.6-201ENST00000411576 835 ntBASIC19.99■□□□□ 0.79
RTL9Q8NET4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL9Q8NET4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms