Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 AC106886.1-201ENST00000568660 600 ntBASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 CTBP2P3-201ENST00000585629 1255 ntBASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEFF1Q8IYR6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEFF1Q8IYR6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.21■□□□□ 0.18
TMEFF1Q8IYR6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TMEFF1Q8IYR6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TMEFF1Q8IYR6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AC022210.1-201ENST00000449856 793 ntBASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AC123567.1-201ENST00000548294 1261 ntBASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AC061975.2-201ENST00000581722 295 ntBASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEFF1Q8IYR6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AC060834.1-201ENST00000443027 2032 ntBASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 MEP1AP4-201ENST00000423244 1087 ntBASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 ELK1P1-201ENST00000485699 580 ntBASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms