Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 AC109322.1-201ENST00000524499 1264 ntBASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 FAM58DP-201ENST00000428076 619 ntBASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 AC105233.2-201ENST00000523697 349 ntBASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 AF228730.5-201ENST00000530288 346 ntBASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 SLC25A39P2-201ENST00000537614 270 ntBASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 AP000842.3-202ENST00000569238 1080 ntBASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM48Q8IWZ4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 CNN2P2-201ENST00000443536 909 ntBASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 CNN2P3-201ENST00000450201 906 ntBASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 CYMP-203ENST00000474680 1263 ntBASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM48Q8IWZ4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms