Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 AL158211.3-201ENST00000607385 239 ntBASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 AC011676.5-201ENST00000624864 2660 ntBASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 LINC01144-201ENST00000626198 1710 ntBASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 AD000864.1-201ENST00000624076 2295 ntBASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN4BQ8IWT1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 AL512638.1-201ENST00000457493 794 ntBASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 AC027369.6-201ENST00000525520 931 ntBASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN4BQ8IWT1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 AC092580.3-201ENST00000430932 139 ntBASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 AC024267.1-201ENST00000582320 895 ntBASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 AC073592.8-201ENST00000624126 511 ntBASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCN4BQ8IWT1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms