Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 AL603756.1-201ENST00000606511 2163 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 KRT8P23-201ENST00000560090 1207 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 AC243562.1-201ENST00000560672 389 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 AC093520.2-201ENST00000561830 333 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 AC015911.4-201ENST00000588022 1070 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 AL031055.1-201ENST00000606362 631 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 AC093525.9-201ENST00000624961 1746 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 AC026691.1-201ENST00000602502 2017 ntBASIC15.73■□□□□ 0.11
RAB43Q86YS6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB43Q86YS6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 WASH6P-202ENST00000359512 1437 ntBASIC15.72■□□□□ 0.11
RAB43Q86YS6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 AC069335.1-201ENST00000489972 472 ntBASIC15.72■□□□□ 0.11
RAB43Q86YS6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 MIR3909-201ENST00000579518 119 ntBASIC15.72■□□□□ 0.11
RAB43Q86YS6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB43Q86YS6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB43Q86YS6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 SPCS2P1-201ENST00000561636 679 ntBASIC15.71■□□□□ 0.11
RAB43Q86YS6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 Z92544.3-201ENST00000624747 417 ntBASIC15.71■□□□□ 0.11
RAB43Q86YS6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 UXT-AS1-201ENST00000590504 1525 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms