Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SKAP1Q86WV1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 SNX18-202ENST00000343017 3140 ntBASIC20.46■□□□□ 0.87
SKAP1Q86WV1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 AL592424.1-201ENST00000563624 1536 ntBASIC20.46■□□□□ 0.87
SKAP1Q86WV1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SKAP1Q86WV1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SKAP1Q86WV1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 LAGE3P1-201ENST00000425356 484 ntBASIC20.45■□□□□ 0.86
SKAP1Q86WV1 SAPCD2P3-201ENST00000455031 850 ntBASIC20.45■□□□□ 0.86
SKAP1Q86WV1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 IFNL4P1-201ENST00000607083 540 ntBASIC20.45■□□□□ 0.86
SKAP1Q86WV1 AL121772.3-201ENST00000610840 674 ntBASIC20.45■□□□□ 0.86
SKAP1Q86WV1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 AC004790.2-201ENST00000623588 572 ntBASIC20.45■□□□□ 0.86
SKAP1Q86WV1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SKAP1Q86WV1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 MIR1224-201ENST00000408193 85 ntBASIC20.44■□□□□ 0.86
SKAP1Q86WV1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 PRELID1P1-202ENST00000567272 903 ntBASIC20.44■□□□□ 0.86
SKAP1Q86WV1 AL049840.3-201ENST00000602669 611 ntBASIC20.44■□□□□ 0.86
SKAP1Q86WV1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SKAP1Q86WV1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms