Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 SOCS2P1-201ENST00000417727 557 ntBASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 AC016694.1-201ENST00000434179 700 ntBASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT28Q7Z3Y7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 AL603756.1-201ENST00000606511 2163 ntBASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT28Q7Z3Y7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 KRT8P37-201ENST00000451609 1420 ntBASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 TOMM22P5-201ENST00000416399 439 ntBASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 RN7SL560P-201ENST00000577943 264 ntBASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.83■■□□□ 1.09
KRT28Q7Z3Y7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT28Q7Z3Y7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.83■■□□□ 1.08
KRT28Q7Z3Y7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT28Q7Z3Y7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.83■■□□□ 1.08
KRT28Q7Z3Y7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT28Q7Z3Y7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT28Q7Z3Y7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT28Q7Z3Y7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT28Q7Z3Y7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT28Q7Z3Y7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT28Q7Z3Y7 AC134312.5-201ENST00000568031 1313 ntBASIC21.82■■□□□ 1.08
KRT28Q7Z3Y7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
KRT28Q7Z3Y7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT28Q7Z3Y7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
KRT28Q7Z3Y7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT28Q7Z3Y7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.82■■□□□ 1.08
KRT28Q7Z3Y7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms