Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 SNHG9-202ENST00000564014 471 ntBASIC10.95□□□□□ -0.66
SCXQ7RTU7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 C20orf181-201ENST00000623918 480 ntBASIC10.95□□□□□ -0.66
SCXQ7RTU7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 BCAR1-209ENST00000546196 1340 ntBASIC10.94□□□□□ -0.66
SCXQ7RTU7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 HLA-DQB1-201ENST00000374943 1656 ntBASIC10.94□□□□□ -0.66
SCXQ7RTU7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SCXQ7RTU7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SCXQ7RTU7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms