Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 MCCD1P2-201ENST00000423228 335 ntBASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 KRT19P2-202ENST00000557173 1012 ntBASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 AC005829.1-201ENST00000570002 483 ntBASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 AC005412.3-201ENST00000580309 715 ntBASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 AC092865.6-201ENST00000642101 219 ntBASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 AC023824.1-201ENST00000562945 2975 ntBASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP1BQ7LBR1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 GPX1P2-201ENST00000429271 606 ntBASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 PDPK2P-202ENST00000562415 1191 ntBASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 AL513190.1-201ENST00000621254 727 ntBASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 AL645728.2-201ENST00000641974 660 ntBASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 AC106886.4-201ENST00000623557 2502 ntBASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP1BQ7LBR1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHMP1BQ7LBR1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms