Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 SPDYE17-201ENST00000412399 783 ntBASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 AL512361.1-201ENST00000554200 418 ntBASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 WASH4P-201ENST00000564273 1246 ntBASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 AC007431.3-201ENST00000623221 587 ntBASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC149Q6ZUS6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CCDC149Q6ZUS6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 GGT4P-201ENST00000623672 1708 ntBASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 MIR1909-201ENST00000411312 80 ntBASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 AL139010.1-201ENST00000454878 894 ntBASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 AL033527.5-202ENST00000641632 1098 ntBASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC149Q6ZUS6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 RPS2P32-201ENST00000439199 892 ntBASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC055876.2-201ENST00000531834 546 ntBASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC106886.1-201ENST00000568660 600 ntBASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 CHCHD2P3-201ENST00000603038 451 ntBASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 MIR6069-201ENST00000620069 79 ntBASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 AC060834.1-201ENST00000443027 2032 ntBASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC149Q6ZUS6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms