Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 AL596257.1-201ENST00000641463 2694 ntBASIC13.52□□□□□ -0.24
TREML4Q6UXN2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TREML4Q6UXN2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 IGHV3-65-201ENST00000523210 341 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 AC004877.2-201ENST00000623941 599 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 Z92544.3-201ENST00000624747 417 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 TUBB8P12-201ENST00000308911 1335 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 TUBB7P-202ENST00000428444 1305 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 BCAR1-209ENST00000546196 1340 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 TUBB8P7-204ENST00000567960 1332 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 AC022762.2-201ENST00000600308 1353 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 ALOX12P2-203ENST00000570921 1945 ntBASIC13.52□□□□□ -0.25
TREML4Q6UXN2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREML4Q6UXN2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 PAUPAR-201ENST00000630360 2965 ntBASIC13.51□□□□□ -0.25
TREML4Q6UXN2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 AC006504.4-201ENST00000592118 1568 ntBASIC13.51□□□□□ -0.25
TREML4Q6UXN2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 SPDYE21P-201ENST00000413323 827 ntBASIC13.51□□□□□ -0.25
TREML4Q6UXN2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 AC008667.4-201ENST00000607370 168 ntBASIC13.51□□□□□ -0.25
TREML4Q6UXN2 AC004790.2-201ENST00000623588 572 ntBASIC13.51□□□□□ -0.25
TREML4Q6UXN2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.51□□□□□ -0.25
TREML4Q6UXN2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms