Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 AC084018.2-201ENST00000613093 2607 ntBASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 AL080243.2-201ENST00000418783 582 ntBASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 AP005018.1-201ENST00000525475 301 ntBASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 AC027307.3-201ENST00000594262 1100 ntBASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 AL365330.1-201ENST00000607459 531 ntBASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 AL358472.5-202ENST00000641448 1267 ntBASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.44■□□□□ 0.38
DCLRE1AQ6PJP8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 SPDYE17-201ENST00000412399 783 ntBASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DCLRE1AQ6PJP8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 CRB3P1-201ENST00000449338 276 ntBASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 AL139010.1-201ENST00000454878 894 ntBASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 POU5F1P6-201ENST00000466990 990 ntBASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 AL008721.1-201ENST00000609964 604 ntBASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DCLRE1AQ6PJP8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms