Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 SLC7A15P-201ENST00000424028 1363 ntBASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 CTBP2P3-201ENST00000585629 1255 ntBASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 MIR4321-201ENST00000592276 80 ntBASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 CU639417.3-201ENST00000624240 1404 ntBASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 LINC01144-201ENST00000626198 1710 ntBASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 AGGF1P2-201ENST00000426656 2106 ntBASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.97■□□□□ 0.63
SHROOM1Q2M3G4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 SERBP1P3-201ENST00000459980 809 ntBASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 AC025048.3-201ENST00000590609 569 ntBASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 AC026979.3-201ENST00000607315 403 ntBASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 AC005702.4-201ENST00000618393 416 ntBASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 HTR7P1-202ENST00000624664 4411 ntBASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.96■□□□□ 0.63
SHROOM1Q2M3G4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 HILS1-202ENST00000545329 423 ntBASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms