Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CDR2Q01850 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDR2Q01850 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.5■□□□□ 0.39
CDR2Q01850 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.5■□□□□ 0.39
CDR2Q01850 AC093724.1-201ENST00000448659 1027 ntBASIC17.5■□□□□ 0.39
CDR2Q01850 KRT18P34-201ENST00000488218 1270 ntBASIC17.5■□□□□ 0.39
CDR2Q01850 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.5■□□□□ 0.39
CDR2Q01850 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.5■□□□□ 0.39
CDR2Q01850 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDR2Q01850 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.5■□□□□ 0.39
CDR2Q01850 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.5■□□□□ 0.39
CDR2Q01850 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.5■□□□□ 0.39
CDR2Q01850 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDR2Q01850 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDR2Q01850 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDR2Q01850 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDR2Q01850 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDR2Q01850 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDR2Q01850 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.5■□□□□ 0.39
CDR2Q01850 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDR2Q01850 AL596257.1-201ENST00000641463 2694 ntBASIC17.5■□□□□ 0.39
CDR2Q01850 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.5■□□□□ 0.39
CDR2Q01850 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.5■□□□□ 0.39
CDR2Q01850 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.5■□□□□ 0.39
CDR2Q01850 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.49■□□□□ 0.39
CDR2Q01850 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.49■□□□□ 0.39
CDR2Q01850 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 AC016027.1-202ENST00000607927 1699 ntBASIC17.49■□□□□ 0.39
CDR2Q01850 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 PDPK2P-202ENST00000562415 1191 ntBASIC17.49■□□□□ 0.39
CDR2Q01850 AC106730.1-201ENST00000566722 1090 ntBASIC17.49■□□□□ 0.39
CDR2Q01850 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.49■□□□□ 0.39
CDR2Q01850 AC120114.3-201ENST00000611923 658 ntBASIC17.49■□□□□ 0.39
CDR2Q01850 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CDR2Q01850 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.49■□□□□ 0.39
CDR2Q01850 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDR2Q01850 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDR2Q01850 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDR2Q01850 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.49■□□□□ 0.39
CDR2Q01850 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDR2Q01850 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.48■□□□□ 0.39
CDR2Q01850 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.48■□□□□ 0.39
CDR2Q01850 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDR2Q01850 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.48■□□□□ 0.39
CDR2Q01850 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.48■□□□□ 0.39
CDR2Q01850 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.48■□□□□ 0.39
CDR2Q01850 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.48■□□□□ 0.39
CDR2Q01850 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDR2Q01850 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.48■□□□□ 0.39
CDR2Q01850 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.48■□□□□ 0.39
CDR2Q01850 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.48■□□□□ 0.39
CDR2Q01850 AC074386.1-202ENST00000463561 864 ntBASIC17.48■□□□□ 0.39
CDR2Q01850 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
CDR2Q01850 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.48■□□□□ 0.39
CDR2Q01850 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.48■□□□□ 0.39
CDR2Q01850 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDR2Q01850 AC068137.2-201ENST00000605408 478 ntBASIC17.48■□□□□ 0.39
CDR2Q01850 AL513190.1-201ENST00000621254 727 ntBASIC17.48■□□□□ 0.39
CDR2Q01850 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDR2Q01850 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDR2Q01850 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.48■□□□□ 0.39
CDR2Q01850 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.48■□□□□ 0.39
CDR2Q01850 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDR2Q01850 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms