Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.56■□□□□ 0.24
WNT3AP56704 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
WNT3AP56704 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
WNT3AP56704 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
WNT3AP56704 HTR5BP-201ENST00000430851 1154 ntBASIC16.56■□□□□ 0.24
WNT3AP56704 ALG1L5P-201ENST00000482043 771 ntBASIC16.56■□□□□ 0.24
WNT3AP56704 FAM86C2P-203ENST00000528684 1004 ntBASIC16.56■□□□□ 0.24
WNT3AP56704 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.56■□□□□ 0.24
WNT3AP56704 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
WNT3AP56704 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.56■□□□□ 0.24
WNT3AP56704 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
WNT3AP56704 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.55■□□□□ 0.24
WNT3AP56704 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
WNT3AP56704 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.55■□□□□ 0.24
WNT3AP56704 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
WNT3AP56704 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.55■□□□□ 0.24
WNT3AP56704 MKNK2P1-201ENST00000437526 628 ntBASIC16.55■□□□□ 0.24
WNT3AP56704 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.55■□□□□ 0.24
WNT3AP56704 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.55■□□□□ 0.24
WNT3AP56704 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.55■□□□□ 0.24
WNT3AP56704 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
WNT3AP56704 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.55■□□□□ 0.24
WNT3AP56704 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.55■□□□□ 0.24
WNT3AP56704 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
WNT3AP56704 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.55■□□□□ 0.24
WNT3AP56704 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.55■□□□□ 0.24
WNT3AP56704 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
WNT3AP56704 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
WNT3AP56704 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
WNT3AP56704 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 AL589702.1-201ENST00000641229 1509 ntBASIC16.55■□□□□ 0.24
WNT3AP56704 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.55■□□□□ 0.24
WNT3AP56704 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
WNT3AP56704 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3AP56704 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
WNT3AP56704 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
WNT3AP56704 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3AP56704 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 ACTG1P14-201ENST00000446382 1122 ntBASIC16.54■□□□□ 0.24
WNT3AP56704 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.54■□□□□ 0.24
WNT3AP56704 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.54■□□□□ 0.24
WNT3AP56704 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
WNT3AP56704 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
WNT3AP56704 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3AP56704 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms