Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GFRA1P56159 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GFRA1P56159 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.64□□□□□ -0.07
GFRA1P56159 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.64□□□□□ -0.07
GFRA1P56159 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.64□□□□□ -0.07
GFRA1P56159 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GFRA1P56159 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
GFRA1P56159 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
GFRA1P56159 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 BCRP1-201ENST00000444246 691 ntBASIC14.63□□□□□ -0.07
GFRA1P56159 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.63□□□□□ -0.07
GFRA1P56159 IGHV3-42-201ENST00000520410 361 ntBASIC14.63□□□□□ -0.07
GFRA1P56159 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.63□□□□□ -0.07
GFRA1P56159 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.63□□□□□ -0.07
GFRA1P56159 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 AL096865.1-201ENST00000606796 927 ntBASIC14.63□□□□□ -0.07
GFRA1P56159 AC026979.3-201ENST00000607315 403 ntBASIC14.63□□□□□ -0.07
GFRA1P56159 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.63□□□□□ -0.07
GFRA1P56159 AL138828.2-201ENST00000615812 383 ntBASIC14.63□□□□□ -0.07
GFRA1P56159 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.63□□□□□ -0.07
GFRA1P56159 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 REXO1L8P-201ENST00000604378 1897 ntBASIC14.63□□□□□ -0.07
GFRA1P56159 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
GFRA1P56159 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
GFRA1P56159 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.63□□□□□ -0.07
GFRA1P56159 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GFRA1P56159 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
GFRA1P56159 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GFRA1P56159 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
GFRA1P56159 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GFRA1P56159 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.62□□□□□ -0.07
GFRA1P56159 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.62□□□□□ -0.07
GFRA1P56159 MTND6P24-201ENST00000440466 518 ntBASIC14.62□□□□□ -0.07
GFRA1P56159 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.62□□□□□ -0.07
GFRA1P56159 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.62□□□□□ -0.07
GFRA1P56159 AC027369.6-201ENST00000525520 931 ntBASIC14.62□□□□□ -0.07
GFRA1P56159 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.62□□□□□ -0.07
GFRA1P56159 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.62□□□□□ -0.07
GFRA1P56159 AL390754.1-201ENST00000619088 582 ntBASIC14.62□□□□□ -0.07
GFRA1P56159 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GFRA1P56159 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.62□□□□□ -0.07
GFRA1P56159 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.62□□□□□ -0.07
GFRA1P56159 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GFRA1P56159 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
GFRA1P56159 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
GFRA1P56159 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GFRA1P56159 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
GFRA1P56159 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 CETN4P-206ENST00000642099 2168 ntBASIC14.61□□□□□ -0.07
GFRA1P56159 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.61□□□□□ -0.07
GFRA1P56159 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.61□□□□□ -0.07
GFRA1P56159 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
GFRA1P56159 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.61□□□□□ -0.07
GFRA1P56159 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.61□□□□□ -0.07
GFRA1P56159 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms