Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H2P55055 GRK6P1-201ENST00000400595 1711 ntBASIC15.63■□□□□ 0.09
NR1H2P55055 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 EGFEM1P-202ENST00000431685 1563 ntBASIC15.62■□□□□ 0.09
NR1H2P55055 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
NR1H2P55055 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.62■□□□□ 0.09
NR1H2P55055 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NR1H2P55055 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NR1H2P55055 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 AKR1C7P-201ENST00000305623 895 ntBASIC15.62■□□□□ 0.09
NR1H2P55055 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NR1H2P55055 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.62■□□□□ 0.09
NR1H2P55055 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NR1H2P55055 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.62■□□□□ 0.09
NR1H2P55055 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.62■□□□□ 0.09
NR1H2P55055 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 GPALPP1-207ENST00000611650 899 ntBASIC15.62■□□□□ 0.09
NR1H2P55055 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.62■□□□□ 0.09
NR1H2P55055 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NR1H2P55055 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NR1H2P55055 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NR1H2P55055 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NR1H2P55055 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.61■□□□□ 0.09
NR1H2P55055 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.61■□□□□ 0.09
NR1H2P55055 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NR1H2P55055 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.61■□□□□ 0.09
NR1H2P55055 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NR1H2P55055 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.61■□□□□ 0.09
NR1H2P55055 KRT18P65-201ENST00000439811 1286 ntBASIC15.61■□□□□ 0.09
NR1H2P55055 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.61■□□□□ 0.09
NR1H2P55055 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.61■□□□□ 0.09
NR1H2P55055 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.61■□□□□ 0.09
NR1H2P55055 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 AC023511.2-201ENST00000618803 211 ntBASIC15.61■□□□□ 0.09
NR1H2P55055 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.61■□□□□ 0.09
NR1H2P55055 AL359258.3-201ENST00000622910 2331 ntBASIC15.61■□□□□ 0.09
NR1H2P55055 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NR1H2P55055 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H2P55055 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H2P55055 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.6■□□□□ 0.09
NR1H2P55055 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NR1H2P55055 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H2P55055 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H2P55055 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H2P55055 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H2P55055 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H2P55055 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.6■□□□□ 0.09
NR1H2P55055 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.6■□□□□ 0.09
NR1H2P55055 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H2P55055 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms