Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN3P51790 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CLCN3P51790 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CLCN3P51790 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
CLCN3P51790 AC026979.3-201ENST00000607315 403 ntBASIC17.93■□□□□ 0.46
CLCN3P51790 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLCN3P51790 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 OR6D1P-203ENST00000641209 4860 ntBASIC17.93■□□□□ 0.46
CLCN3P51790 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN3P51790 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN3P51790 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN3P51790 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLCN3P51790 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLCN3P51790 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN3P51790 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CLCN3P51790 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLCN3P51790 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN3P51790 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN3P51790 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN3P51790 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLCN3P51790 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN3P51790 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCN3P51790 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCN3P51790 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN3P51790 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN3P51790 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.92■□□□□ 0.46
CLCN3P51790 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN3P51790 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLCN3P51790 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLCN3P51790 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN3P51790 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 AC079328.2-201ENST00000561241 3354 ntBASIC17.92■□□□□ 0.46
CLCN3P51790 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.92■□□□□ 0.46
CLCN3P51790 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN3P51790 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN3P51790 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN3P51790 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN3P51790 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.91■□□□□ 0.46
CLCN3P51790 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN3P51790 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 AD000864.1-201ENST00000624076 2295 ntBASIC17.91■□□□□ 0.46
CLCN3P51790 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLCN3P51790 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CLCN3P51790 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN3P51790 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN3P51790 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN3P51790 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CLCN3P51790 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.91■□□□□ 0.46
CLCN3P51790 AC190387.1-201ENST00000551683 408 ntBASIC17.91■□□□□ 0.46
CLCN3P51790 MIR4321-201ENST00000592276 80 ntBASIC17.91■□□□□ 0.46
CLCN3P51790 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN3P51790 AC009118.2-201ENST00000613275 655 ntBASIC17.91■□□□□ 0.46
CLCN3P51790 AC004840.1-201ENST00000636359 365 ntBASIC17.91■□□□□ 0.46
CLCN3P51790 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN3P51790 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLCN3P51790 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN3P51790 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN3P51790 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.9■□□□□ 0.46
CLCN3P51790 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLCN3P51790 RN7SL618P-201ENST00000477850 296 ntBASIC17.9■□□□□ 0.46
CLCN3P51790 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.9■□□□□ 0.46
CLCN3P51790 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.9■□□□□ 0.46
CLCN3P51790 AC010336.2-201ENST00000564226 506 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms