Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.02■□□□□ 0.48
CPT1AP50416 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.02■□□□□ 0.48
CPT1AP50416 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 TMEM261P1-201ENST00000604899 340 ntBASIC18.02■□□□□ 0.48
CPT1AP50416 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.02■□□□□ 0.47
CPT1AP50416 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPT1AP50416 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPT1AP50416 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
CPT1AP50416 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
CPT1AP50416 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.01■□□□□ 0.47
CPT1AP50416 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.01■□□□□ 0.47
CPT1AP50416 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.01■□□□□ 0.47
CPT1AP50416 HIST3H2BA-201ENST00000436555 524 ntBASIC18.01■□□□□ 0.47
CPT1AP50416 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.01■□□□□ 0.47
CPT1AP50416 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.01■□□□□ 0.47
CPT1AP50416 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.01■□□□□ 0.47
CPT1AP50416 RARRES2P5-201ENST00000564013 466 ntBASIC18.01■□□□□ 0.47
CPT1AP50416 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.01■□□□□ 0.47
CPT1AP50416 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CPT1AP50416 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.01■□□□□ 0.47
CPT1AP50416 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.01■□□□□ 0.47
CPT1AP50416 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.01■□□□□ 0.47
CPT1AP50416 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPT1AP50416 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CPT1AP50416 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CPT1AP50416 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18■□□□□ 0.47
CPT1AP50416 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 MIR1909-201ENST00000411312 80 ntBASIC18■□□□□ 0.47
CPT1AP50416 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 AC098850.1-201ENST00000419919 790 ntBASIC18■□□□□ 0.47
CPT1AP50416 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18■□□□□ 0.47
CPT1AP50416 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 AC104596.2-201ENST00000512793 793 ntBASIC18■□□□□ 0.47
CPT1AP50416 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18■□□□□ 0.47
CPT1AP50416 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
CPT1AP50416 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPT1AP50416 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CPT1AP50416 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPT1AP50416 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPT1AP50416 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.99■□□□□ 0.47
CPT1AP50416 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.99■□□□□ 0.47
CPT1AP50416 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
CPT1AP50416 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CPT1AP50416 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CPT1AP50416 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPT1AP50416 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPT1AP50416 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.99■□□□□ 0.47
CPT1AP50416 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CPT1AP50416 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.99■□□□□ 0.47
CPT1AP50416 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPT1AP50416 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.99■□□□□ 0.47
CPT1AP50416 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.99■□□□□ 0.47
CPT1AP50416 AC007389.4-201ENST00000454674 793 ntBASIC17.99■□□□□ 0.47
CPT1AP50416 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.99■□□□□ 0.47
CPT1AP50416 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.99■□□□□ 0.47
CPT1AP50416 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.99■□□□□ 0.47
CPT1AP50416 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.99■□□□□ 0.47
CPT1AP50416 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.99■□□□□ 0.47
CPT1AP50416 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPT1AP50416 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms