Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NEDD4P46934 LINC02199-201ENST00000506655 2702 ntBASIC19.24■□□□□ 0.67
NEDD4P46934 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
NEDD4P46934 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.24■□□□□ 0.67
NEDD4P46934 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.24■□□□□ 0.67
NEDD4P46934 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NEDD4P46934 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
NEDD4P46934 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.24■□□□□ 0.67
NEDD4P46934 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.24■□□□□ 0.67
NEDD4P46934 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.24■□□□□ 0.67
NEDD4P46934 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.24■□□□□ 0.67
NEDD4P46934 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.24■□□□□ 0.67
NEDD4P46934 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.24■□□□□ 0.67
NEDD4P46934 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.24■□□□□ 0.67
NEDD4P46934 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.23■□□□□ 0.67
NEDD4P46934 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
NEDD4P46934 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.23■□□□□ 0.67
NEDD4P46934 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.23■□□□□ 0.67
NEDD4P46934 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NEDD4P46934 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.23■□□□□ 0.67
NEDD4P46934 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NEDD4P46934 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.23■□□□□ 0.67
NEDD4P46934 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.23■□□□□ 0.67
NEDD4P46934 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.23■□□□□ 0.67
NEDD4P46934 AC004449.1-201ENST00000564240 433 ntBASIC19.23■□□□□ 0.67
NEDD4P46934 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.23■□□□□ 0.67
NEDD4P46934 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.23■□□□□ 0.67
NEDD4P46934 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NEDD4P46934 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NEDD4P46934 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.23■□□□□ 0.67
NEDD4P46934 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.23■□□□□ 0.67
NEDD4P46934 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NEDD4P46934 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.22■□□□□ 0.67
NEDD4P46934 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.22■□□□□ 0.67
NEDD4P46934 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 CYP2T1P-202ENST00000641596 2535 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 AL596087.1-201ENST00000400979 1969 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NEDD4P46934 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.22■□□□□ 0.67
NEDD4P46934 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
NEDD4P46934 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NEDD4P46934 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.22■□□□□ 0.67
NEDD4P46934 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.22■□□□□ 0.67
NEDD4P46934 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 AC069262.1-201ENST00000539058 672 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.22■□□□□ 0.67
NEDD4P46934 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NEDD4P46934 MIR4453-201ENST00000584019 89 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 MIR4321-201ENST00000592276 80 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 AC018529.1-201ENST00000613063 361 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEDD4P46934 AC046158.3-201ENST00000624947 2558 ntBASIC19.22■□□□□ 0.67
NEDD4P46934 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.21■□□□□ 0.67
NEDD4P46934 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
NEDD4P46934 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms