Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDNFP39905 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.35□□□□□ -0.11
GDNFP39905 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDNFP39905 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.35□□□□□ -0.11
GDNFP39905 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
GDNFP39905 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.35□□□□□ -0.11
GDNFP39905 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GDNFP39905 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.35□□□□□ -0.11
GDNFP39905 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.35□□□□□ -0.11
GDNFP39905 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDNFP39905 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDNFP39905 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.35□□□□□ -0.11
GDNFP39905 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDNFP39905 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GDNFP39905 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GDNFP39905 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GDNFP39905 LINC02447-202ENST00000501888 2146 ntBASIC14.35□□□□□ -0.11
GDNFP39905 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GDNFP39905 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.34□□□□□ -0.11
GDNFP39905 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 AC112504.1-201ENST00000623415 1841 ntBASIC14.34□□□□□ -0.11
GDNFP39905 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GDNFP39905 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.34□□□□□ -0.11
GDNFP39905 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GDNFP39905 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.34□□□□□ -0.11
GDNFP39905 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.34□□□□□ -0.11
GDNFP39905 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.34□□□□□ -0.11
GDNFP39905 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.34□□□□□ -0.11
GDNFP39905 AL591684.3-201ENST00000605187 298 ntBASIC14.34□□□□□ -0.11
GDNFP39905 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.34□□□□□ -0.11
GDNFP39905 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GDNFP39905 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GDNFP39905 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.34□□□□□ -0.11
GDNFP39905 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
GDNFP39905 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
GDNFP39905 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GDNFP39905 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
GDNFP39905 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
GDNFP39905 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GDNFP39905 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
GDNFP39905 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GDNFP39905 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GDNFP39905 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms