Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGCLP35914 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HMGCLP35914 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HMGCLP35914 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HMGCLP35914 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.29■□□□□ 0.2
HMGCLP35914 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HMGCLP35914 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 HLA-H-201ENST00000383620 1096 ntBASIC16.29■□□□□ 0.2
HMGCLP35914 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HMGCLP35914 FAM58DP-201ENST00000428076 619 ntBASIC16.29■□□□□ 0.2
HMGCLP35914 AC245100.5-201ENST00000452108 331 ntBASIC16.29■□□□□ 0.2
HMGCLP35914 AC023141.5-201ENST00000458585 616 ntBASIC16.29■□□□□ 0.2
HMGCLP35914 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HMGCLP35914 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGCLP35914 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.29■□□□□ 0.2
HMGCLP35914 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGCLP35914 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.29■□□□□ 0.2
HMGCLP35914 MIR4321-201ENST00000592276 80 ntBASIC16.29■□□□□ 0.2
HMGCLP35914 AL691403.2-201ENST00000618460 490 ntBASIC16.29■□□□□ 0.2
HMGCLP35914 AC139530.3-201ENST00000620344 690 ntBASIC16.29■□□□□ 0.2
HMGCLP35914 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGCLP35914 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HMGCLP35914 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.29■□□□□ 0.2
HMGCLP35914 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
HMGCLP35914 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
HMGCLP35914 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HMGCLP35914 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMGCLP35914 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGCLP35914 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.28■□□□□ 0.2
HMGCLP35914 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMGCLP35914 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGCLP35914 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGCLP35914 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HMGCLP35914 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
HMGCLP35914 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCLP35914 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCLP35914 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.28■□□□□ 0.2
HMGCLP35914 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCLP35914 AC061975.2-201ENST00000581722 295 ntBASIC16.28■□□□□ 0.2
HMGCLP35914 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCLP35914 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HMGCLP35914 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.28■□□□□ 0.2
HMGCLP35914 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCLP35914 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMGCLP35914 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.28■□□□□ 0.2
HMGCLP35914 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.27■□□□□ 0.2
HMGCLP35914 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HMGCLP35914 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HMGCLP35914 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HMGCLP35914 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGCLP35914 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 AP3S2-216ENST00000617003 1561 ntBASIC16.27■□□□□ 0.2
HMGCLP35914 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.27■□□□□ 0.2
HMGCLP35914 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGCLP35914 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.27■□□□□ 0.2
HMGCLP35914 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.27■□□□□ 0.2
HMGCLP35914 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms