Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GABRA3P34903 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRA3P34903 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.27■□□□□ 0.04
GABRA3P34903 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA3P34903 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.27■□□□□ 0.04
GABRA3P34903 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA3P34903 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRA3P34903 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.27■□□□□ 0.04
GABRA3P34903 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRA3P34903 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA3P34903 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.27■□□□□ 0.04
GABRA3P34903 PGAM5P1-201ENST00000518923 814 ntBASIC15.27■□□□□ 0.04
GABRA3P34903 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.27■□□□□ 0.04
GABRA3P34903 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.27■□□□□ 0.04
GABRA3P34903 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA3P34903 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.27■□□□□ 0.04
GABRA3P34903 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
GABRA3P34903 AL391005.1-201ENST00000623953 2435 ntBASIC15.27■□□□□ 0.03
GABRA3P34903 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.27■□□□□ 0.03
GABRA3P34903 AL596087.1-201ENST00000400979 1969 ntBASIC15.27■□□□□ 0.03
GABRA3P34903 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABRA3P34903 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
GABRA3P34903 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
GABRA3P34903 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABRA3P34903 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.27■□□□□ 0.03
GABRA3P34903 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GABRA3P34903 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.27■□□□□ 0.03
GABRA3P34903 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABRA3P34903 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GABRA3P34903 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.27■□□□□ 0.03
GABRA3P34903 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GABRA3P34903 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 AL671883.3-201ENST00000603274 991 ntBASIC15.26■□□□□ 0.03
GABRA3P34903 AC091812.2-201ENST00000619081 385 ntBASIC15.26■□□□□ 0.03
GABRA3P34903 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GABRA3P34903 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 FLJ16779-201ENST00000612722 7638 ntBASIC15.26■□□□□ 0.03
GABRA3P34903 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 AL513523.2-202ENST00000427283 2040 ntBASIC15.26■□□□□ 0.03
GABRA3P34903 AC026691.1-201ENST00000602502 2017 ntBASIC15.26■□□□□ 0.03
GABRA3P34903 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GABRA3P34903 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.26■□□□□ 0.03
GABRA3P34903 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
GABRA3P34903 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.26■□□□□ 0.03
GABRA3P34903 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GABRA3P34903 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA3P34903 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GABRA3P34903 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.25■□□□□ 0.03
GABRA3P34903 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA3P34903 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.25■□□□□ 0.03
GABRA3P34903 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GABRA3P34903 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA3P34903 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.25■□□□□ 0.03
GABRA3P34903 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA3P34903 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA3P34903 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GABRA3P34903 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GABRA3P34903 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA3P34903 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
GABRA3P34903 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA3P34903 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA3P34903 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.25■□□□□ 0.03
GABRA3P34903 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms