Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HOXC12P31275 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.58□□□□□ -0.08
HOXC12P31275 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.58□□□□□ -0.08
HOXC12P31275 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.58□□□□□ -0.08
HOXC12P31275 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.58□□□□□ -0.08
HOXC12P31275 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 TERF1P3-201ENST00000505638 1227 ntBASIC14.58□□□□□ -0.08
HOXC12P31275 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HOXC12P31275 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.58□□□□□ -0.08
HOXC12P31275 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.58□□□□□ -0.08
HOXC12P31275 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.58□□□□□ -0.08
HOXC12P31275 AC012645.4-201ENST00000610691 1061 ntBASIC14.58□□□□□ -0.08
HOXC12P31275 AC026120.1-201ENST00000611536 926 ntBASIC14.58□□□□□ -0.08
HOXC12P31275 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.58□□□□□ -0.08
HOXC12P31275 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HOXC12P31275 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.58□□□□□ -0.08
HOXC12P31275 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HOXC12P31275 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 KRT8P39-201ENST00000396270 1433 ntBASIC14.58□□□□□ -0.08
HOXC12P31275 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
HOXC12P31275 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HOXC12P31275 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HOXC12P31275 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.57□□□□□ -0.08
HOXC12P31275 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.57□□□□□ -0.08
HOXC12P31275 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HOXC12P31275 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HOXC12P31275 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HOXC12P31275 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 TFAMP1-201ENST00000412727 736 ntBASIC14.57□□□□□ -0.08
HOXC12P31275 AL627223.1-201ENST00000416693 442 ntBASIC14.57□□□□□ -0.08
HOXC12P31275 ADH5P3-201ENST00000433842 1137 ntBASIC14.57□□□□□ -0.08
HOXC12P31275 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.57□□□□□ -0.08
HOXC12P31275 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.57□□□□□ -0.08
HOXC12P31275 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
HOXC12P31275 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.57□□□□□ -0.08
HOXC12P31275 AC005225.4-201ENST00000557330 545 ntBASIC14.57□□□□□ -0.08
HOXC12P31275 AL135744.1-201ENST00000565098 629 ntBASIC14.57□□□□□ -0.08
HOXC12P31275 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.57□□□□□ -0.08
HOXC12P31275 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 AC099522.2-201ENST00000607001 744 ntBASIC14.57□□□□□ -0.08
HOXC12P31275 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
HOXC12P31275 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
HOXC12P31275 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HOXC12P31275 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.57□□□□□ -0.08
HOXC12P31275 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.57□□□□□ -0.08
HOXC12P31275 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.57□□□□□ -0.08
HOXC12P31275 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HOXC12P31275 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.57□□□□□ -0.08
HOXC12P31275 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
HOXC12P31275 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HOXC12P31275 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC12P31275 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC12P31275 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC12P31275 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms