Protein–RNA interactions for Protein: P13473

LAMP2, Lysosome-associated membrane glycoprotein 2, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2P13473 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LAMP2P13473 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.78■□□□□ 0.28
LAMP2P13473 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
LAMP2P13473 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LAMP2P13473 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LAMP2P13473 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LAMP2P13473 KRT223P-202ENST00000449164 1292 ntBASIC16.78■□□□□ 0.28
LAMP2P13473 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.78■□□□□ 0.28
LAMP2P13473 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
LAMP2P13473 RARRES2P5-201ENST00000564013 466 ntBASIC16.78■□□□□ 0.28
LAMP2P13473 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.78■□□□□ 0.28
LAMP2P13473 AC008735.3-201ENST00000596646 500 ntBASIC16.78■□□□□ 0.28
LAMP2P13473 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LAMP2P13473 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.78■□□□□ 0.28
LAMP2P13473 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LAMP2P13473 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.78■□□□□ 0.28
LAMP2P13473 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.78■□□□□ 0.28
LAMP2P13473 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LAMP2P13473 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LAMP2P13473 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.77■□□□□ 0.28
LAMP2P13473 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.77■□□□□ 0.28
LAMP2P13473 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.77■□□□□ 0.28
LAMP2P13473 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LAMP2P13473 FO393414.2-201ENST00000405153 598 ntBASIC16.77■□□□□ 0.28
LAMP2P13473 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.77■□□□□ 0.28
LAMP2P13473 AC104596.2-201ENST00000512793 793 ntBASIC16.77■□□□□ 0.28
LAMP2P13473 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.77■□□□□ 0.28
LAMP2P13473 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.77■□□□□ 0.28
LAMP2P13473 AC025048.3-201ENST00000590609 569 ntBASIC16.77■□□□□ 0.28
LAMP2P13473 AC015936.2-201ENST00000593177 259 ntBASIC16.77■□□□□ 0.28
LAMP2P13473 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.77■□□□□ 0.28
LAMP2P13473 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 AC005702.4-201ENST00000618393 416 ntBASIC16.77■□□□□ 0.28
LAMP2P13473 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LAMP2P13473 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.77■□□□□ 0.28
LAMP2P13473 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.77■□□□□ 0.27
LAMP2P13473 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 PCDHB18P-201ENST00000524813 2368 ntBASIC16.77■□□□□ 0.27
LAMP2P13473 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LAMP2P13473 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 CDC14C-201ENST00000428251 1719 ntBASIC16.76■□□□□ 0.27
LAMP2P13473 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LAMP2P13473 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LAMP2P13473 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.76■□□□□ 0.27
LAMP2P13473 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LAMP2P13473 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 OR6D1P-203ENST00000641209 4860 ntBASIC16.76■□□□□ 0.27
LAMP2P13473 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.76■□□□□ 0.27
LAMP2P13473 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.76■□□□□ 0.27
LAMP2P13473 CLK3P2-201ENST00000427566 1453 ntBASIC16.76■□□□□ 0.27
LAMP2P13473 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.76■□□□□ 0.27
LAMP2P13473 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.76■□□□□ 0.27
LAMP2P13473 AC092552.1-201ENST00000547243 906 ntBASIC16.76■□□□□ 0.27
LAMP2P13473 SNX29P1-201ENST00000548357 1007 ntBASIC16.76■□□□□ 0.27
LAMP2P13473 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.76■□□□□ 0.27
LAMP2P13473 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LAMP2P13473 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 LETM1P2-201ENST00000597330 2178 ntBASIC16.76■□□□□ 0.27
LAMP2P13473 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LAMP2P13473 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LAMP2P13473 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms