Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP2P08253 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP2P08253 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MMP2P08253 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP2P08253 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.46■□□□□ 0.23
MMP2P08253 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP2P08253 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MMP2P08253 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MMP2P08253 LINC02199-201ENST00000506655 2702 ntBASIC16.46■□□□□ 0.22
MMP2P08253 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.46■□□□□ 0.22
MMP2P08253 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MMP2P08253 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP2P08253 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MMP2P08253 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.45■□□□□ 0.22
MMP2P08253 MIR1233-2-201ENST00000408138 82 ntBASIC16.45■□□□□ 0.22
MMP2P08253 MIR1233-1-201ENST00000408722 82 ntBASIC16.45■□□□□ 0.22
MMP2P08253 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP2P08253 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.45■□□□□ 0.22
MMP2P08253 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.45■□□□□ 0.22
MMP2P08253 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 AC004835.2-201ENST00000603762 682 ntBASIC16.45■□□□□ 0.22
MMP2P08253 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 AP3S2-216ENST00000617003 1561 ntBASIC16.45■□□□□ 0.22
MMP2P08253 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP2P08253 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP2P08253 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP2P08253 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP2P08253 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP2P08253 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP2P08253 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MMP2P08253 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.45■□□□□ 0.22
MMP2P08253 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
MMP2P08253 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MMP2P08253 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MMP2P08253 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MMP2P08253 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.44■□□□□ 0.22
MMP2P08253 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 AC008677.1-201ENST00000519230 1561 ntBASIC16.44■□□□□ 0.22
MMP2P08253 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP2P08253 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP2P08253 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP2P08253 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.44■□□□□ 0.22
MMP2P08253 MIR648-201ENST00000385046 94 ntBASIC16.44■□□□□ 0.22
MMP2P08253 DNAJB3-202ENST00000449667 1266 ntBASIC16.44■□□□□ 0.22
MMP2P08253 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.44■□□□□ 0.22
MMP2P08253 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
MMP2P08253 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP2P08253 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.44■□□□□ 0.22
MMP2P08253 AC027612.4-201ENST00000605371 583 ntBASIC16.44■□□□□ 0.22
MMP2P08253 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
MMP2P08253 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP2P08253 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP2P08253 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP2P08253 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MMP2P08253 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP2P08253 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms