Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CAPN1P07384 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.2■□□□□ 0.18
CAPN1P07384 KRT19P2-202ENST00000557173 1012 ntBASIC16.2■□□□□ 0.18
CAPN1P07384 AC091167.2-201ENST00000579581 588 ntBASIC16.2■□□□□ 0.18
CAPN1P07384 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPN1P07384 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 AC079781.4-201ENST00000641908 219 ntBASIC16.2■□□□□ 0.18
CAPN1P07384 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.2■□□□□ 0.18
CAPN1P07384 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPN1P07384 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 MTHFR-217ENST00000641820 1569 ntBASIC16.2■□□□□ 0.18
CAPN1P07384 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 SLC22A20-204ENST00000530038 1673 ntBASIC16.2■□□□□ 0.18
CAPN1P07384 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPN1P07384 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.2■□□□□ 0.18
CAPN1P07384 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 BCAR1-209ENST00000546196 1340 ntBASIC16.19■□□□□ 0.18
CAPN1P07384 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN1P07384 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CAPN1P07384 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.19■□□□□ 0.18
CAPN1P07384 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN1P07384 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.19■□□□□ 0.18
CAPN1P07384 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN1P07384 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
CAPN1P07384 MIR4469-201ENST00000583919 79 ntBASIC16.19■□□□□ 0.18
CAPN1P07384 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.19■□□□□ 0.18
CAPN1P07384 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CAPN1P07384 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 GGT4P-201ENST00000623672 1708 ntBASIC16.19■□□□□ 0.18
CAPN1P07384 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CAPN1P07384 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPN1P07384 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPN1P07384 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPN1P07384 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CAPN1P07384 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN1P07384 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms