Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC025048.6-201ENST00000634326 1161 ntBASIC15.4■□□□□ 0.06
PDGFAP04085 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 AC100757.3-201ENST00000622361 1406 ntBASIC15.4■□□□□ 0.06
PDGFAP04085 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDGFAP04085 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.4■□□□□ 0.06
PDGFAP04085 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 HCG4-201ENST00000418983 998 ntBASIC15.39■□□□□ 0.05
PDGFAP04085 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.39■□□□□ 0.05
PDGFAP04085 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 AC027369.6-201ENST00000525520 931 ntBASIC15.39■□□□□ 0.05
PDGFAP04085 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.39■□□□□ 0.05
PDGFAP04085 AL008721.1-201ENST00000609964 604 ntBASIC15.39■□□□□ 0.05
PDGFAP04085 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 AL590560.3-201ENST00000623350 461 ntBASIC15.39■□□□□ 0.05
PDGFAP04085 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
PDGFAP04085 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.39■□□□□ 0.05
PDGFAP04085 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDGFAP04085 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDGFAP04085 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.38■□□□□ 0.05
PDGFAP04085 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PDGFAP04085 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PDGFAP04085 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
PDGFAP04085 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.38■□□□□ 0.05
PDGFAP04085 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
PDGFAP04085 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.38■□□□□ 0.05
PDGFAP04085 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.38■□□□□ 0.05
PDGFAP04085 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.38■□□□□ 0.05
PDGFAP04085 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.38■□□□□ 0.05
PDGFAP04085 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.38■□□□□ 0.05
PDGFAP04085 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 AL596325.1-201ENST00000563991 1082 ntBASIC15.38■□□□□ 0.05
PDGFAP04085 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.38■□□□□ 0.05
PDGFAP04085 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.38■□□□□ 0.05
PDGFAP04085 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.38■□□□□ 0.05
PDGFAP04085 AC073592.8-201ENST00000624126 511 ntBASIC15.38■□□□□ 0.05
PDGFAP04085 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.38■□□□□ 0.05
PDGFAP04085 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
PDGFAP04085 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.38■□□□□ 0.05
PDGFAP04085 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms