Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 UPF3AP2-201ENST00000457924 1132 ntBASIC16.27■□□□□ 0.2
PDGFBP01127 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFBP01127 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PDGFBP01127 AC244452.3-201ENST00000636814 210 ntBASIC16.27■□□□□ 0.2
PDGFBP01127 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFBP01127 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
PDGFBP01127 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFBP01127 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.27■□□□□ 0.19
PDGFBP01127 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.27■□□□□ 0.19
PDGFBP01127 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFBP01127 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.27■□□□□ 0.19
PDGFBP01127 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFBP01127 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.27■□□□□ 0.19
PDGFBP01127 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PDGFBP01127 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFBP01127 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFBP01127 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFBP01127 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PDGFBP01127 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PDGFBP01127 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFBP01127 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PDGFBP01127 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.26■□□□□ 0.19
PDGFBP01127 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PDGFBP01127 RPL13P2-201ENST00000440687 659 ntBASIC16.26■□□□□ 0.19
PDGFBP01127 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.26■□□□□ 0.19
PDGFBP01127 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFBP01127 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
PDGFBP01127 HIST2H2BC-201ENST00000498492 580 ntBASIC16.26■□□□□ 0.19
PDGFBP01127 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFBP01127 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFBP01127 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PDGFBP01127 AC092053.1-201ENST00000605787 1936 ntBASIC16.25■□□□□ 0.19
PDGFBP01127 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
PDGFBP01127 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PDGFBP01127 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PDGFBP01127 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PDGFBP01127 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFBP01127 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.25■□□□□ 0.19
PDGFBP01127 AC093433.1-201ENST00000458048 571 ntBASIC16.25■□□□□ 0.19
PDGFBP01127 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.25■□□□□ 0.19
PDGFBP01127 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.25■□□□□ 0.19
PDGFBP01127 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFBP01127 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFBP01127 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.25■□□□□ 0.19
PDGFBP01127 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.25■□□□□ 0.19
PDGFBP01127 AC128714.1-201ENST00000637035 887 ntBASIC16.25■□□□□ 0.19
PDGFBP01127 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.25■□□□□ 0.19
PDGFBP01127 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.25■□□□□ 0.19
PDGFBP01127 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 AL512652.2-201ENST00000625156 1716 ntBASIC16.25■□□□□ 0.19
PDGFBP01127 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDGFBP01127 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDGFBP01127 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.24■□□□□ 0.19
PDGFBP01127 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms