Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
ALDH1A1P00352 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
ALDH1A1P00352 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 Z93015.1-201ENST00000451718 390 ntBASIC18.45■□□□□ 0.54
ALDH1A1P00352 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ALDH1A1P00352 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.45■□□□□ 0.54
ALDH1A1P00352 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 TOMM22P5-201ENST00000416399 439 ntBASIC18.44■□□□□ 0.54
ALDH1A1P00352 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 AC093433.1-201ENST00000458048 571 ntBASIC18.44■□□□□ 0.54
ALDH1A1P00352 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 AL049840.4-201ENST00000602422 811 ntBASIC18.44■□□□□ 0.54
ALDH1A1P00352 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.44■□□□□ 0.54
ALDH1A1P00352 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 AC138028.6-201ENST00000616106 1482 ntBASIC18.44■□□□□ 0.54
ALDH1A1P00352 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ALDH1A1P00352 AL391256.1-201ENST00000443260 1855 ntBASIC18.43■□□□□ 0.54
ALDH1A1P00352 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 AC004987.2-201ENST00000395959 1148 ntBASIC18.43■□□□□ 0.54
ALDH1A1P00352 AL662890.1-201ENST00000396818 632 ntBASIC18.43■□□□□ 0.54
ALDH1A1P00352 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 AC106760.1-201ENST00000508690 800 ntBASIC18.43■□□□□ 0.54
ALDH1A1P00352 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms