Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.12■□□□□ 0.49
LGR5O75473 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.12■□□□□ 0.49
LGR5O75473 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 AL139010.1-201ENST00000454878 894 ntBASIC18.12■□□□□ 0.49
LGR5O75473 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.12■□□□□ 0.49
LGR5O75473 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 AL512361.1-201ENST00000554200 418 ntBASIC18.12■□□□□ 0.49
LGR5O75473 AC010336.2-201ENST00000564226 506 ntBASIC18.12■□□□□ 0.49
LGR5O75473 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
LGR5O75473 AL008721.1-201ENST00000609964 604 ntBASIC18.12■□□□□ 0.49
LGR5O75473 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LGR5O75473 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LGR5O75473 PRORSD1P-202ENST00000563365 2154 ntBASIC18.11■□□□□ 0.49
LGR5O75473 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 UBALD1-205ENST00000590891 2641 ntBASIC18.11■□□□□ 0.49
LGR5O75473 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.11■□□□□ 0.49
LGR5O75473 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LGR5O75473 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LGR5O75473 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.11■□□□□ 0.49
LGR5O75473 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.11■□□□□ 0.49
LGR5O75473 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.11■□□□□ 0.49
LGR5O75473 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.11■□□□□ 0.49
LGR5O75473 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.11■□□□□ 0.49
LGR5O75473 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
LGR5O75473 AC004840.1-201ENST00000636359 365 ntBASIC18.11■□□□□ 0.49
LGR5O75473 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.11■□□□□ 0.49
LGR5O75473 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.11■□□□□ 0.49
LGR5O75473 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
LGR5O75473 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LGR5O75473 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.11■□□□□ 0.49
LGR5O75473 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.11■□□□□ 0.49
LGR5O75473 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LGR5O75473 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LGR5O75473 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.1■□□□□ 0.49
LGR5O75473 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 CICP6-201ENST00000457191 2729 ntBASIC18.1■□□□□ 0.49
LGR5O75473 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.1■□□□□ 0.49
LGR5O75473 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.1■□□□□ 0.49
LGR5O75473 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LGR5O75473 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.1■□□□□ 0.49
LGR5O75473 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
LGR5O75473 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.1■□□□□ 0.49
LGR5O75473 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LGR5O75473 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 AC007274.1-201ENST00000439805 662 ntBASIC18.1■□□□□ 0.49
LGR5O75473 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.1■□□□□ 0.49
LGR5O75473 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.1■□□□□ 0.49
LGR5O75473 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
LGR5O75473 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LGR5O75473 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.1■□□□□ 0.49
LGR5O75473 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LGR5O75473 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.09■□□□□ 0.49
LGR5O75473 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.09■□□□□ 0.49
LGR5O75473 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LGR5O75473 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms