Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 NSUN5P1-202ENST00000421140 1535 ntBASIC12.85□□□□□ -0.35
ZNF253O75346 NSUN5P2-203ENST00000457352 1529 ntBASIC12.85□□□□□ -0.35
ZNF253O75346 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ZNF253O75346 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF253O75346 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
ZNF253O75346 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 RCN1P2-201ENST00000398357 915 ntBASIC12.85□□□□□ -0.35
ZNF253O75346 LINC00982-205ENST00000420957 435 ntBASIC12.85□□□□□ -0.35
ZNF253O75346 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF253O75346 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF253O75346 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 TPSP2-201ENST00000561760 610 ntBASIC12.85□□□□□ -0.35
ZNF253O75346 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 TNRC18P2-201ENST00000417666 2714 ntBASIC12.85□□□□□ -0.35
ZNF253O75346 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF253O75346 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 C8orf49-201ENST00000525043 1968 ntBASIC12.85□□□□□ -0.35
ZNF253O75346 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF253O75346 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 AC005332.1-201ENST00000577698 1310 ntBASIC12.85□□□□□ -0.35
ZNF253O75346 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF253O75346 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF253O75346 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 AC006277.1-201ENST00000624348 1610 ntBASIC12.84□□□□□ -0.35
ZNF253O75346 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ZNF253O75346 AL031133.1-201ENST00000406807 723 ntBASIC12.84□□□□□ -0.35
ZNF253O75346 IGHV3-47-201ENST00000425060 335 ntBASIC12.84□□□□□ -0.35
ZNF253O75346 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.84□□□□□ -0.35
ZNF253O75346 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.84□□□□□ -0.35
ZNF253O75346 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
ZNF253O75346 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF253O75346 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF253O75346 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF253O75346 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms