Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AP000842.3-202ENST00000569238 1080 ntBASIC15.69■□□□□ 0.1
LCMT2O60294 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.69■□□□□ 0.1
LCMT2O60294 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.69■□□□□ 0.1
LCMT2O60294 AL596442.2-201ENST00000610240 980 ntBASIC15.69■□□□□ 0.1
LCMT2O60294 AC139530.3-201ENST00000620344 690 ntBASIC15.69■□□□□ 0.1
LCMT2O60294 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LCMT2O60294 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LCMT2O60294 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.69■□□□□ 0.1
LCMT2O60294 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
LCMT2O60294 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCMT2O60294 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 AL592424.1-201ENST00000563624 1536 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 UXT-AS1-201ENST00000590504 1525 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 AL589702.1-201ENST00000641229 1509 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.68■□□□□ 0.1
LCMT2O60294 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LCMT2O60294 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.68■□□□□ 0.1
LCMT2O60294 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.68■□□□□ 0.1
LCMT2O60294 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.68■□□□□ 0.1
LCMT2O60294 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.68■□□□□ 0.1
LCMT2O60294 AC254562.1-201ENST00000417586 456 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.68■□□□□ 0.1
LCMT2O60294 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.68■□□□□ 0.1
LCMT2O60294 AC142381.1-201ENST00000426099 345 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 FAM58DP-201ENST00000428076 619 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 AP006288.1-201ENST00000446065 395 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 DNAJB3-202ENST00000449667 1266 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LCMT2O60294 AP000344.2-201ENST00000512987 629 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 AC105233.2-201ENST00000523697 349 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 AF228730.5-201ENST00000530288 346 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 KRT8P23-201ENST00000560090 1207 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 SPTSSB-204ENST00000617024 1292 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 AL691403.2-201ENST00000618460 490 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LCMT2O60294 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.68■□□□□ 0.1
LCMT2O60294 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.68■□□□□ 0.1
LCMT2O60294 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.68■□□□□ 0.1
LCMT2O60294 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCMT2O60294 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.67■□□□□ 0.1
LCMT2O60294 U82695.1-201ENST00000635752 1889 ntBASIC15.67■□□□□ 0.1
LCMT2O60294 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.67■□□□□ 0.1
LCMT2O60294 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 AC005237.2-201ENST00000434368 219 ntBASIC15.67■□□□□ 0.1
LCMT2O60294 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.67■□□□□ 0.1
LCMT2O60294 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.67■□□□□ 0.1
LCMT2O60294 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.67■□□□□ 0.1
LCMT2O60294 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.67■□□□□ 0.1
LCMT2O60294 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms