Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.6■□□□□ 0.25
AP3B1O00203 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.6■□□□□ 0.25
AP3B1O00203 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
AP3B1O00203 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 AC092919.2-201ENST00000623631 1645 ntBASIC16.59■□□□□ 0.25
AP3B1O00203 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.59■□□□□ 0.25
AP3B1O00203 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
AP3B1O00203 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.59■□□□□ 0.25
AP3B1O00203 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.59■□□□□ 0.25
AP3B1O00203 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
AP3B1O00203 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.59■□□□□ 0.25
AP3B1O00203 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.59■□□□□ 0.25
AP3B1O00203 AL161645.1-201ENST00000622716 1255 ntBASIC16.59■□□□□ 0.25
AP3B1O00203 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.59■□□□□ 0.25
AP3B1O00203 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 HLA-A-201ENST00000376802 1334 ntBASIC16.59■□□□□ 0.25
AP3B1O00203 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
AP3B1O00203 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
AP3B1O00203 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
AP3B1O00203 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.59■□□□□ 0.25
AP3B1O00203 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3B1O00203 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
AP3B1O00203 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.58■□□□□ 0.25
AP3B1O00203 AC024909.3-201ENST00000611513 2257 ntBASIC16.58■□□□□ 0.25
AP3B1O00203 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP3B1O00203 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP3B1O00203 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP3B1O00203 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.58■□□□□ 0.25
AP3B1O00203 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP3B1O00203 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
AP3B1O00203 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
AP3B1O00203 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.58■□□□□ 0.24
AP3B1O00203 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.58■□□□□ 0.24
AP3B1O00203 AC093724.1-201ENST00000448659 1027 ntBASIC16.58■□□□□ 0.24
AP3B1O00203 AC245100.5-201ENST00000452108 331 ntBASIC16.58■□□□□ 0.24
AP3B1O00203 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
AP3B1O00203 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.58■□□□□ 0.24
AP3B1O00203 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.58■□□□□ 0.24
AP3B1O00203 AL078644.1-201ENST00000609881 752 ntBASIC16.58■□□□□ 0.24
AP3B1O00203 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AP3B1O00203 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AP3B1O00203 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.58■□□□□ 0.24
AP3B1O00203 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AP3B1O00203 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.58■□□□□ 0.24
AP3B1O00203 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
AP3B1O00203 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.58■□□□□ 0.24
AP3B1O00203 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.58■□□□□ 0.24
AP3B1O00203 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3B1O00203 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms