Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 FAM58DP-201ENST00000428076 619 ntBASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 AC125807.1-201ENST00000483097 614 ntBASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 LINC01225-203ENST00000563550 1244 ntBASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TMX2-CTNND1H3BSU7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 AC008267.7-201ENST00000624570 1194 ntBASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMX2-CTNND1H3BSU7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TMX2-CTNND1H3BSU7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TMX2-CTNND1H3BSU7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TMX2-CTNND1H3BSU7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TMX2-CTNND1H3BSU7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TMX2-CTNND1H3BSU7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 AC244107.1-201ENST00000442033 332 ntBASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 AC026150.2-201ENST00000564693 1156 ntBASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMX2-CTNND1H3BSU7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms