Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 AC007326.2-201ENST00000624224 7579 ntBASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 PCED1CP-201ENST00000419887 785 ntBASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 AC087163.2-201ENST00000457299 853 ntBASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 MIR3180-1-201ENST00000580374 94 ntBASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 MIR3180-3-201ENST00000584616 94 ntBASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 NKAPP1-205ENST00000585790 367 ntBASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV5A0A0B4J249 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 CYP2A7P1-201ENST00000595391 815 ntBASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 AL139424.1-201ENST00000607572 797 ntBASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 AC010654.1-201ENST00000615722 808 ntBASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 AL022326.1-202ENST00000641533 845 ntBASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 SLC22A20-204ENST00000530038 1673 ntBASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 PPT1-215ENST00000641471 2368 ntBASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV5A0A0B4J249 AC069224.1-201ENST00000566372 1715 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms