Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 AC020658.6-201ENST00000623564 1870 ntBASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 AL845331.1-201ENST00000424978 1190 ntBASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 ATP5G2P1-201ENST00000433580 426 ntBASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 PRELID1P1-202ENST00000567272 903 ntBASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 AC092119.3-201ENST00000612618 583 ntBASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGB1Q9Y5G3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 AC067930.6-201ENST00000623257 4947 ntBASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 AC007292.2-201ENST00000593524 1812 ntBASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 AP002414.1-201ENST00000391405 1147 ntBASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 AL020989.1-201ENST00000422979 469 ntBASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 POU5F1P6-201ENST00000466990 990 ntBASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGB1Q9Y5G3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.08■□□□□ 0.01
PCDHGB1Q9Y5G3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGB1Q9Y5G3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
PCDHGB1Q9Y5G3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.08■□□□□ 0.01
PCDHGB1Q9Y5G3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.08■□□□□ 0.01
PCDHGB1Q9Y5G3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
PCDHGB1Q9Y5G3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHGB1Q9Y5G3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms