Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 ME2P1-201ENST00000426028 1970 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 FAAHP1-202ENST00000446499 1238 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 FAM197Y8-203ENST00000450145 560 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AF186996.4-201ENST00000467186 377 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 RNPS1P1-201ENST00000507437 918 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 KRT126P-201ENST00000549467 1181 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 RN7SL510P-201ENST00000581311 263 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AC006557.2-201ENST00000592985 1240 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AL139424.1-201ENST00000607572 797 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AL603832.2-201ENST00000566195 2125 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AC138035.3-201ENST00000622706 2791 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 FRMD8P1-201ENST00000440433 1524 ntBASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 CICP13-201ENST00000422015 2789 ntBASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 LAGE3P1-201ENST00000425356 484 ntBASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 OR7E14P-202ENST00000530490 1290 ntBASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms