Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 AC004890.2-204ENST00000481968 304 ntBASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 AL590560.3-201ENST00000623350 461 ntBASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPC1L1Q9UHC9 AC087499.5-201ENST00000452760 1342 ntBASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPC1L1Q9UHC9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 AC024909.3-201ENST00000611513 2257 ntBASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 LINC02447-202ENST00000501888 2146 ntBASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NPC1L1Q9UHC9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPC1L1Q9UHC9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 AZGP1P1-201ENST00000411909 902 ntBASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 AC136604.1-201ENST00000418535 575 ntBASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 AC241585.1-201ENST00000433527 519 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms