Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 DUSP5P1-201ENST00000441325 1139 ntBASIC16.2■□□□□ 0.18
MKS1Q9NXB0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
MKS1Q9NXB0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.19■□□□□ 0.18
MKS1Q9NXB0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 IGHV3-65-201ENST00000523210 341 ntBASIC16.19■□□□□ 0.18
MKS1Q9NXB0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 AC021087.4-201ENST00000563761 564 ntBASIC16.19■□□□□ 0.18
MKS1Q9NXB0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MKS1Q9NXB0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.18■□□□□ 0.18
MKS1Q9NXB0 AC136632.2-201ENST00000512891 861 ntBASIC16.18■□□□□ 0.18
MKS1Q9NXB0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms