Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 ZNF890P-202ENST00000530367 1156 ntBASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PAAF1Q9BRP4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 MIR4321-201ENST00000592276 80 ntBASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 AL132655.2-201ENST00000596276 594 ntBASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 AC026979.3-201ENST00000607315 403 ntBASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 AL033527.5-202ENST00000641632 1098 ntBASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PAAF1Q9BRP4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 AC007541.1-201ENST00000570282 1469 ntBASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 AL139010.1-201ENST00000454878 894 ntBASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 AC138932.1-201ENST00000534164 6830 ntBASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.37■□□□□ 0.37
PAAF1Q9BRP4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.36■□□□□ 0.37
PAAF1Q9BRP4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms