Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 REXO1L8P-201ENST00000604378 1897 ntBASIC16.65■□□□□ 0.26
SEMA3CQ99985 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 SPCS2P4-201ENST00000436160 681 ntBASIC16.65■□□□□ 0.26
SEMA3CQ99985 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 AC008267.7-201ENST00000624570 1194 ntBASIC16.65■□□□□ 0.26
SEMA3CQ99985 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 KRT18P28-201ENST00000453838 1332 ntBASIC16.65■□□□□ 0.26
SEMA3CQ99985 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.65■□□□□ 0.26
SEMA3CQ99985 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEMA3CQ99985 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SEMA3CQ99985 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SEMA3CQ99985 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.64■□□□□ 0.26
SEMA3CQ99985 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.64■□□□□ 0.26
SEMA3CQ99985 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
SEMA3CQ99985 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 AC022145.2-201ENST00000598203 171 ntBASIC16.64■□□□□ 0.25
SEMA3CQ99985 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SEMA3CQ99985 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.64■□□□□ 0.25
SEMA3CQ99985 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms