Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AD001527.2-201ENST00000622994 785 ntBASIC18.8■□□□□ 0.6
ARID3AQ99856 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.8■□□□□ 0.6
ARID3AQ99856 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ARID3AQ99856 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
ARID3AQ99856 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ARID3AQ99856 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.8■□□□□ 0.6
ARID3AQ99856 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.8■□□□□ 0.6
ARID3AQ99856 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ARID3AQ99856 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARID3AQ99856 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.79■□□□□ 0.6
ARID3AQ99856 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.79■□□□□ 0.6
ARID3AQ99856 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.79■□□□□ 0.6
ARID3AQ99856 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.79■□□□□ 0.6
ARID3AQ99856 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.79■□□□□ 0.6
ARID3AQ99856 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.79■□□□□ 0.6
ARID3AQ99856 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.79■□□□□ 0.6
ARID3AQ99856 AC103564.2-201ENST00000432853 1299 ntBASIC18.79■□□□□ 0.6
ARID3AQ99856 KRT18P31-201ENST00000506277 1292 ntBASIC18.79■□□□□ 0.6
ARID3AQ99856 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.79■□□□□ 0.6
ARID3AQ99856 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.79■□□□□ 0.6
ARID3AQ99856 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.79■□□□□ 0.6
ARID3AQ99856 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.79■□□□□ 0.6
ARID3AQ99856 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.79■□□□□ 0.6
ARID3AQ99856 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ARID3AQ99856 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ARID3AQ99856 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.79■□□□□ 0.6
ARID3AQ99856 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ARID3AQ99856 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARID3AQ99856 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.78■□□□□ 0.6
ARID3AQ99856 AC099063.4-201ENST00000641099 1602 ntBASIC18.78■□□□□ 0.6
ARID3AQ99856 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.78■□□□□ 0.6
ARID3AQ99856 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.78■□□□□ 0.6
ARID3AQ99856 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.78■□□□□ 0.6
ARID3AQ99856 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.78■□□□□ 0.6
ARID3AQ99856 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.78■□□□□ 0.6
ARID3AQ99856 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 TSPY19P-201ENST00000418461 509 ntBASIC18.78■□□□□ 0.6
ARID3AQ99856 TSPY18P-201ENST00000441642 509 ntBASIC18.78■□□□□ 0.6
ARID3AQ99856 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.78■□□□□ 0.6
ARID3AQ99856 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.78■□□□□ 0.6
ARID3AQ99856 AL591684.3-201ENST00000605187 298 ntBASIC18.78■□□□□ 0.6
ARID3AQ99856 AC138035.3-201ENST00000622706 2791 ntBASIC18.78■□□□□ 0.6
ARID3AQ99856 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 AC073347.1-201ENST00000421633 2643 ntBASIC18.78■□□□□ 0.6
ARID3AQ99856 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARID3AQ99856 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ARID3AQ99856 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ARID3AQ99856 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ARID3AQ99856 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ARID3AQ99856 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARID3AQ99856 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARID3AQ99856 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARID3AQ99856 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARID3AQ99856 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARID3AQ99856 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.77■□□□□ 0.6
ARID3AQ99856 KCP-203ENST00000610776 5108 ntTSL 5 BASIC18.77■□□□□ 0.6
ARID3AQ99856 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARID3AQ99856 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms