Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SMOQ99835 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMOQ99835 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.13■□□□□ 0.33
SMOQ99835 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.13■□□□□ 0.33
SMOQ99835 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SMOQ99835 AC084018.2-201ENST00000613093 2607 ntBASIC17.13■□□□□ 0.33
SMOQ99835 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.13■□□□□ 0.33
SMOQ99835 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.13■□□□□ 0.33
SMOQ99835 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SMOQ99835 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.13■□□□□ 0.33
SMOQ99835 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 AC097493.3-201ENST00000509725 367 ntBASIC17.13■□□□□ 0.33
SMOQ99835 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.13■□□□□ 0.33
SMOQ99835 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.13■□□□□ 0.33
SMOQ99835 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.13■□□□□ 0.33
SMOQ99835 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SMOQ99835 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.13■□□□□ 0.33
SMOQ99835 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SMOQ99835 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.13■□□□□ 0.33
SMOQ99835 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SMOQ99835 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMOQ99835 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SMOQ99835 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.12■□□□□ 0.33
SMOQ99835 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.12■□□□□ 0.33
SMOQ99835 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMOQ99835 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.12■□□□□ 0.33
SMOQ99835 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SMOQ99835 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.12■□□□□ 0.33
SMOQ99835 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.12■□□□□ 0.33
SMOQ99835 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.12■□□□□ 0.33
SMOQ99835 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.12■□□□□ 0.33
SMOQ99835 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.12■□□□□ 0.33
SMOQ99835 AL158211.3-201ENST00000607385 239 ntBASIC17.12■□□□□ 0.33
SMOQ99835 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SMOQ99835 SPDYE12P-201ENST00000618416 771 ntBASIC17.12■□□□□ 0.33
SMOQ99835 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SMOQ99835 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.12■□□□□ 0.33
SMOQ99835 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SMOQ99835 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.12■□□□□ 0.33
SMOQ99835 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
SMOQ99835 AL035456.1-201ENST00000456064 1369 ntBASIC17.12■□□□□ 0.33
SMOQ99835 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.12■□□□□ 0.33
SMOQ99835 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMOQ99835 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SMOQ99835 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SMOQ99835 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMOQ99835 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SMOQ99835 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.11■□□□□ 0.33
SMOQ99835 MTND6P24-201ENST00000440466 518 ntBASIC17.11■□□□□ 0.33
SMOQ99835 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.11■□□□□ 0.33
SMOQ99835 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.11■□□□□ 0.33
SMOQ99835 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMOQ99835 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMOQ99835 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms