Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.54□□□□□ -0.08
SPENQ96T58 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SPENQ96T58 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.54□□□□□ -0.08
SPENQ96T58 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.54□□□□□ -0.08
SPENQ96T58 AC124283.3-201ENST00000570869 594 ntBASIC14.54□□□□□ -0.08
SPENQ96T58 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.54□□□□□ -0.08
SPENQ96T58 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.54□□□□□ -0.08
SPENQ96T58 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SPENQ96T58 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.53□□□□□ -0.08
SPENQ96T58 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.53□□□□□ -0.08
SPENQ96T58 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
SPENQ96T58 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.53□□□□□ -0.08
SPENQ96T58 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.53□□□□□ -0.08
SPENQ96T58 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 U82695.1-201ENST00000635752 1889 ntBASIC14.53□□□□□ -0.08
SPENQ96T58 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 AC005915.1-201ENST00000624912 2018 ntBASIC14.53□□□□□ -0.08
SPENQ96T58 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.53□□□□□ -0.08
SPENQ96T58 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.53□□□□□ -0.08
SPENQ96T58 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.53□□□□□ -0.08
SPENQ96T58 ACTG1P17-201ENST00000558391 1119 ntBASIC14.53□□□□□ -0.08
SPENQ96T58 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.53□□□□□ -0.08
SPENQ96T58 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.53□□□□□ -0.08
SPENQ96T58 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPENQ96T58 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
SPENQ96T58 SDHAP3-202ENST00000515467 728 ntBASIC14.53□□□□□ -0.08
SPENQ96T58 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SPENQ96T58 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SPENQ96T58 AC105020.1-201ENST00000435356 2205 ntBASIC14.52□□□□□ -0.08
SPENQ96T58 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SPENQ96T58 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SPENQ96T58 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.52□□□□□ -0.08
SPENQ96T58 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.52□□□□□ -0.08
SPENQ96T58 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.52□□□□□ -0.08
SPENQ96T58 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SPENQ96T58 AL022328.1-201ENST00000610050 478 ntBASIC14.52□□□□□ -0.08
SPENQ96T58 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SPENQ96T58 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.52□□□□□ -0.08
SPENQ96T58 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.52□□□□□ -0.08
SPENQ96T58 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SPENQ96T58 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPENQ96T58 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SPENQ96T58 NOC2LP2-201ENST00000407594 1944 ntBASIC14.52□□□□□ -0.08
SPENQ96T58 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPENQ96T58 KLF2P4-201ENST00000451959 1225 ntBASIC14.52□□□□□ -0.09
SPENQ96T58 RPL13AP20-201ENST00000459725 609 ntBASIC14.52□□□□□ -0.09
SPENQ96T58 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SPENQ96T58 AC103810.3-201ENST00000583567 96 ntBASIC14.52□□□□□ -0.09
SPENQ96T58 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SPENQ96T58 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms