Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 OR8S1-201ENST00000310194 1080 ntBASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDK5RAP2Q96SN8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CDK5RAP2Q96SN8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDK5RAP2Q96SN8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDK5RAP2Q96SN8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.02■□□□□ 0.63
CDK5RAP2Q96SN8 AP001282.1-201ENST00000531301 1499 ntBASIC19.02■□□□□ 0.63
CDK5RAP2Q96SN8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AL353779.1-201ENST00000434793 351 ntBASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 DOC2GP-202ENST00000514950 1163 ntBASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 IGHV3-71-201ENST00000523324 359 ntBASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AC004987.2-201ENST00000395959 1148 ntBASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 ELK1P1-201ENST00000485699 580 ntBASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AC123567.1-201ENST00000548294 1261 ntBASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.01■□□□□ 0.63
CDK5RAP2Q96SN8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 AC119751.2-201ENST00000504529 210 ntBASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 CTBP2P3-201ENST00000585629 1255 ntBASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19■□□□□ 0.63
CDK5RAP2Q96SN8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 FO393414.2-201ENST00000405153 598 ntBASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 SDHAP3-202ENST00000515467 728 ntBASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 BRI3BPP1-201ENST00000594224 787 ntBASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP2Q96SN8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms